All Metagenomic articles
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NewsEMBL pays tribute to Peer Bork (1963—2026)
The European Molecular Biology Laboratory has paid tribute to its Interim Director General, Professor Peer Bork who passed away in January. The institution reflects on the extraordinary impact Peer had on the world of science.
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News‘Hidden’ bugs in our gut appear key to good health, finds global study
A single group of bacteria has repeatedly shown up in high numbers in the gut microbiomes of healthy people. Scientists found the level of CAG-170 bacteria present was consistently higher in healthy people than those with diseases including inflammatory bowel disease, obesity and chronic fatigue syndrome.
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NewsMicrobiomes interconnect on a planetary-scale, new study finds
Scientists reveal that microbes living in similar habitats are more alike than those simply inhabiting the same geographical region. By analysing tens of thousands of metagenomes, they found that while most microbes adapt to a specific ecosystem, generalists can thrive across very different habitats.
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NewsNew study reveals cyanobacteria may help spread antibiotic resistance in estuarine ecosystems
Scientists have discovered that cyanobacteria may play a major role in spreading antibiotic resistance genes in coastal environments. The findings highlight a previously overlooked link between natural nutrient cycling and the global challenge of antibiotic resistance.
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NewsTracking antibiotic resistance in the environment gets a high tech upgrade
Antibiotic resistance is often framed as a hospital problem, but a growing body of evidence shows that the environment plays an equally critical role in the global spread of drug resistant bacteria. Rivers, soils, wastewater, and even the air can act as reservoirs for antibiotic resistance genes that may eventually ...
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NewsGrowing together, bacterium after bacterium
Social interaction among babies in their first year of life influences and enriches the diversity of their gut microbial strains, based on the findings of a study on microbiome transmission.
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NewsEarly intervention of cyanobacterial risks starting from the genome?
A new study proposes using “~3 Mbp” as a threshold to establish a genome size-oriented proxy indicator for cyanobacterial risk early warning.
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NewsFirst extensive study into marsupial gut microbiomes reveals new microbial species and antimicrobial resistance
New research provides the first metagenomic data for 13 marsupial species , including the red kangaroo and the common brushtail possum. They revealed that host family, animal location, and diet all contributed towards variance between different microbiomes.
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NewsRising temperatures reshape microbial carbon cycling during animal carcass decomposition in water
Using metagenomic sequencing across a realistic temperature gradient, researchers show that carcass decay triggers a surge in carbon-degradation genes, while warming selectively favors pathways that rapidly consume easily degradable carbon.
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NewsNew evidence reveals Streptococcus anginosus drives gastric cancer development
A recent study has revealed a novel cancer-promoting mechanism of Streptococcus anginosus. The research shows that methionine metabolites produced by this bacterium can significantly contribute to the development of gastric cancer.
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NewsSoil microbes in Colombia’s páramo and tropical forests respond to seasonal shifts
A new study has demonstrated that microbial communities in the soil of Colombia’s tropical forests and high-altitude páramos are significantly influenced by seasonal changes, particularly during the dry season.
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NewsHidden viruses in wastewater treatment may shape public health risks, study finds
A new study reveals that viral communities in wastewater treatment plants are far more complex and influential than previously recognized, with implications for water safety, antibiotic resistance, and how treatment performance is monitored.
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NewsSmarter tools for peering into the microscopic world
In a pair of new studies, researchers introduce powerful tools that make it easier, more accurate and more scalable to figure out how microbes are related. One tool improves how scientists build microbial family trees. The other provides a software foundation used worldwide to analyze biological data.
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NewsNovel kirkovirus may be associated with colitis in horses
In a pilot study, researchers have found a novel kirkovirus that may be associated with colitis – and potentially small colon impactions – in horses. The study could offer a route to new therapies for horses with colitis symptoms from unknown causes.
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NewsMicrobiome of an entire country is mapped for the first time
An international research team has systematically mapped the microbiome of an entire country for the first time. More than 10,000 environmental samples from across Denmark were analyzed, resulting in an atlas of environmental microbiomes with unprecedented spatial resolution and functional depth.
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NewsVIRE: a global data platform to better understand viruses
Researchers have released a comprehensive viral genome database covering diverse ecosystems to advance the understanding of viral evolution and ecosystem functions.
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CareersScientific Event Travel Grant: Hannah returns with renewed motivation and new ideas
Dr Hannah Trivett, University of Birmingham, reports back from EMBL Human Microbiome Conference held in Heidelberg, Germany, where she presented her research with the support of AMI’s Scientific Event Travel Grant.
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NewsMarine viruses use ‘hijacked’ genes to take over bacteria and exploit their energy systems
Marine viruses deploy a sophisticated Trojan horse maneuver that enables them to dismantle the energy systems of ocean bacteria and use the breakdown products for self-replication, according to a new study.
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NewsHospital bug jumps from lungs to gut, raising sepsis risk
A hospital-acquired bacterium that causes serious infections can move from the lungs to the gut inside the same patient, raising the risk of life-threatening sepsis, new research reveals.
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NewsNew software tool fast-tracks identification and response to microbial threats
MARTi is an open-source software tool that powers real-time analysis and visualisation of metagenomic data. The team have created an accessible interface which increases the usability and accessibility of metagenomic analysis.